Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQPSCAAQLTQLAPCARVGV----APAPGQPLPAPPAECCSALGAVSHDCACGTLD--------------------------------IINSL--PAKCGLPRVTCQ
1BEA Chain:A ((14-109))
--------HNPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI---
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -25124 for 348 contacts (-72.2/contact) +
2D Compatibility (PS) -5789 + (NN) -459 + (LL) 764
1D Compatibility (HY) -5200 + (ID) 750
Total energy: -36558.0 ( -105.05 by residue)
QMean score : 0.361
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: