Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ICNLSDAGLQACKPAAAVR----NPADTP----SSECCDALAAADLPCLCRYKGSAGARVWV--RF-YG----ID---------LNRAMTL--PGKCGLTLPAHC
1BEA Chain:A ((15-110))
------NPLPSCRWYVTSRTCGIGPRL-PWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATIS--
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22501 for 411 contacts (-54.7/contact) +
2D Compatibility (PS) -7800 + (NN) -5390 + (LL) 404
1D Compatibility (HY) 400 + (ID) 850
Total energy: -35737.0 ( -86.95 by residue)
QMean score : 0.323
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: