Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSICDMDINDMQKCRPAIT----GNNPPPP----VNDCCVVVRKANFECLCRFK-----FY---LPI-LR-------------IDPSKVVAL--VAKCGVTTVPRSCQV
1BEA Chain:A ((12-110))
-----IPHNPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATIS-----
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19094 for 367 contacts (-52.0/contact) +
2D Compatibility (PS) -6845 + (NN) -4311 + (LL) 804
1D Compatibility (HY) 400 + (ID) 800
Total energy: -29846.0 ( -81.32 by residue)
QMean score : 0.282
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: