Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DGAGECGATPPDKMALKLAPCASAAKDP------KST---PSSGCCTAVHTIGKQSPKCLCAVMLSSTTR-----N----------AG----I-K-PEVAITIPKRCNIADRPVGYKCGDYTLP
1B1U Chain:A ((16-110))
----------------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI---PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIHG----------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -32063 for 409 contacts (-78.4/contact) +
2D Compatibility (PS) -6482 + (NN) -525 + (LL) 128
1D Compatibility (HY) -2800 + (ID) 550
Total energy: -42292.0 ( -103.40 by residue)
QMean score : 0.335
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: