Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ITCGQVASSISPCVNYVKS---GGA---------------VPAACCNGIRSLNSAAKTTADRQTTCNCLKQASGAIK----GLNP-----NLAAGLPGKCGVNVPYKISTSTNCAAVK
1W2Q Chain:A ((22-114))
------RVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-----N-TQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFRAP-------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28346 for 404 contacts (-70.2/contact) +
2D Compatibility (PS) -6520 + (NN) -830 + (LL) 1900
1D Compatibility (HY) -1600 + (ID) 600
Total energy: -35996.0 ( -89.10 by residue)
QMean score : 0.319
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: