Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AIECSDVLSRPVHCLSYFVTPRATL-T---PTSACCRESEEVLGMANSMGAKEDLCNCFVGLIRGF----RP----------NPNKIEGLLSSCALQLFFPIDPVTALPDCTQIQ
1HSS Chain:A ((15-103))
--------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHIS--------EWCRCGALYSMLDSMYKEH--GAFPRCRREVVKLTAASITAVCRLPI-----------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37784 for 424 contacts (-89.1/contact) +
2D Compatibility (PS) -5806 + (NN) 2842 + (LL) 1996
1D Compatibility (HY) -2800 + (ID) 300
Total energy: -41852.0 ( -98.71 by residue)
QMean score : 0.200
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: