Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AISCGQVSSSLAQCIGYLQKG--GA-----VPAACCSGLKGLNSAATTTADRQGVCNCLKSLAGKIS---G---------INYGLAAGLPSKCGVSISYKISPSTDCKSVK
1HSS Chain:A ((15-105))
--------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEH-GAFPRCRREVVKLTAASITAVCRLPIVV------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -60439 for 416 contacts (-145.3/contact) +
2D Compatibility (PS) -6505 + (NN) -2575 + (LL) 1192
1D Compatibility (HY) -5600 + (ID) 750
Total energy: -74677.0 ( -179.51 by residue)
QMean score : 0.394
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: