Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ASSCN--PSALSACAPALFG--RAVTLGCCASLRAQQPCLCQYKRDPA------------NRAY--VNGPAAQRFTRACGLTQM-------KC----
1FK5 Chain:A ((1-93))
AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNA----ARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -29570 for 354 contacts (-83.5/contact) +
2D Compatibility (PS) -6247 + (NN) 2195 + (LL) 444
1D Compatibility (HY) -2400 + (ID) 900
Total energy: -36478.0 ( -103.05 by residue)
QMean score : 0.655
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: