Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATTCAPT--QLTPCAPAIVGNAAPTAACCARLKA-----------HPATCFCQYKRNPSMQRY--VNSPNGKKVFAACKVSLPRC
1T12 Chain:A ((1-78))
AITCGQVTSNLAPCLAYLRNTG-PLGRCCGGVKALVNSARTTEDRQ-IACTC--LKSAA-GAISGINLGKAAGLPSTCGVNIP--
General information:
TITO was launched using:
RESULT:
Template:
1T12.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -13933 for 394 contacts (-35.4/contact) +
2D Compatibility (PS) -5981 + (NN) 3472 + (LL) 580
1D Compatibility (HY) -4800 + (ID) 850
Total energy: -21512.0 ( -54.60 by residue)
QMean score : 0.327
(partial model without unconserved sides chains):
PDB file :
Tito_1T12.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1T12-query.scw
PDB file :
Tito_Scwrl_1T12.pdb
: