Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QSDCTNVLISMSPCLNYITGNSS---TP---SSQCCTQLASVVRSSPQCLCQVLNGGGS----SLGI-------E-VNKTQAIALPGACNVQT-PPISSCN
1HSS Chain:A ((16-107))
---------ALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI---SEWCRCGALYSMLDSMYKEH--GAFPRCRREVVKLTAASITAVCRLPIVVDA----
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35008 for 394 contacts (-88.9/contact) +
2D Compatibility (PS) -6421 + (NN) -659 + (LL) 832
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -45606.0 ( -115.75 by residue)
QMean score : 0.315
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: