Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AVCDMSNEQFMSCQPAAAKTT--DPPAA----PSQACCDALAGADLKCLCGYKNSPWMGV--------------Y-N--ID----PKRAMELPAKCGLATPPDC
1B1U Chain:A ((13-109))
-----PHNPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIH--
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11585 for 459 contacts (-25.2/contact) +
2D Compatibility (PS) -7275 + (NN) -3171 + (LL) 504
1D Compatibility (HY) -2400 + (ID) 750
Total energy: -24677.0 ( -53.76 by residue)
QMean score : 0.434
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: