Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQCTSQLNNLNVCAPFVVP---GAANTNP----NAECCNALEAVQHDCLCSTLQ---------------------------------ISSRLPSQCNLPPLTCGN
1B1U Chain:A ((15-108))
-------NPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATI----
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31241 for 326 contacts (-95.8/contact) +
2D Compatibility (PS) -5613 + (NN) -3259 + (LL) 472
1D Compatibility (HY) -3600 + (ID) 800
Total energy: -44041.0 ( -135.10 by residue)
QMean score : 0.576
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: