Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AGECGRSTTPDMEAFKLAPCASAAQDTT----SP-----VSSQCCAQVKKMGQNPPCLCAVMLS---NTAK------S---S--------GVQPENAITI--PKRCNIANRPVGYKCGAYTLP
1BEA Chain:A ((16-109))
---------------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADI--PAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI------------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -22429 for 380 contacts (-59.0/contact) +
2D Compatibility (PS) -6571 + (NN) -2150 + (LL) 700
1D Compatibility (HY) -4000 + (ID) 700
Total energy: -35150.0 ( -92.50 by residue)
QMean score : 0.295
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: