Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTLCDIDDKGLADCKPSVT----QPNPVDP----SPDCCEALKGADLACLCSYKNSMW------LPS------FG--------IDPMLALSL--PPKCNLQMPPNC
1BEA Chain:A ((12-109))
-----IPHNPLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI---
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28190 for 412 contacts (-68.4/contact) +
2D Compatibility (PS) -7172 + (NN) -5687 + (LL) 252
1D Compatibility (HY) -3600 + (ID) 900
Total energy: -45297.0 ( -109.94 by residue)
QMean score : 0.362
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: