Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------ETSLLAPSCADVTKAVAPCLNFLKGKGGADPSQACCDGARDLAKEARTKNDRQAICECLKTALGKVGSYDASRVP-LIAKKCNVDINIPPINDKTDCSKAVSSIMPKSL |
1JMX Chain:A ((282-363)) | GKARLLAVQPAFIKAGGESE-----ITLVGSGLAGKPDLG--AGVEVTEVLEQTP-------TLVRLKARAAADAKPGQREVAVGTLKGVNLAVYD------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JMX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 10071 for 526 contacts (19.1/contact) +
2D Compatibility (PS) -7854 + (NN) -1355 + (LL) 1920
1D Compatibility (HY) 800 + (ID) 200
Total energy: 3382.0 ( 6.43 by residue)
QMean score : 0.061
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