Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ESNNCSKGANYFFPCINYVGGF---SP------------KPAKDCCSGLEELNKMAKEKEGPENICQCIEDMAYVTNV-----PF----IASRVQSLPEDCHIHLSFPISISMNCSRV
1SM7 Chain:A ((13-100))
---------QHLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE--------DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQ-------------
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -57592 for 432 contacts (-133.3/contact) +
2D Compatibility (PS) -6299 + (NN) 836 + (LL) 1416
1D Compatibility (HY) -2000 + (ID) 750
Total energy: -64389.0 ( -149.05 by residue)
QMean score : 0.182
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: