Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QAACASKLTPCFPFLNNATA------QP-----------TADCCNPIKDTVANDLECLCNLYNDP--NL---LSSLNI--TV-AAALRISRECGVTTDLSACNV
1W2Q Chain:A ((24-112))
------NLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEME-NTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR--------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42697 for 390 contacts (-109.5/contact) +
2D Compatibility (PS) -6324 + (NN) 1190 + (LL) 1160
1D Compatibility (HY) -4000 + (ID) 550
Total energy: -51221.0 ( -131.34 by residue)
QMean score : 0.326
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: