Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
TTNEPTVCNIALTKLNLCRPAVT----GQYPPP----PTKECCGLMKQANLTCLCKFKEA--------LP--------AF-E--ID----PARAFALPKKCNLRTPPQCKV
1B1U Chain:A ((11-109))
--------AIPHNPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIH----
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27750 for 409 contacts (-67.8/contact) +
2D Compatibility (PS) -6948 + (NN) -4216 + (LL) 720
1D Compatibility (HY) -1200 + (ID) 800
Total energy: -40194.0 ( -98.27 by residue)
QMean score : 0.461
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: