Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DSDQDKEECTQQLV---ALATCLPYVGGD----A--K---------APTPDCCSGLKQVLNNNKKCLCVIIKDRNDPD-----L-GLNI--NVTLALALPSVCNAPANVSKCPG
1SM7 Chain:A ((4-105))
-------KCQREFQQEQHLRACQQWIRQQLAGSPFSENQWGPQQGPSLREQCCNELYQE---DQVCVCPTLKQAAKSVRVQGQHGPFQSTRIYQIAKNLPNVCNMKQ-IGTCP-
General information:
TITO was launched using:
RESULT:
Template:
1SM7.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -36036 for 537 contacts (-67.1/contact) +
2D Compatibility (PS) -7236 + (NN) 1862 + (LL) -204
1D Compatibility (HY) -5200 + (ID) 900
Total energy: -47714.0 ( -88.85 by residue)
QMean score : 0.306
(partial model without unconserved sides chains):
PDB file :
Tito_1SM7.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SM7-query.scw
PDB file :
Tito_Scwrl_1SM7.pdb
: