Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DWAEDKKECSNQLVALSTCIPFVGGN-----TKVP----DSTCCTNLRKKINQTKKCLCLLVADRNDP---------------DLG--FKVNAT--LALILPSICHAPSN--ASECPAEANKSSQ
1B1U Chain:A ((16-118))
--------------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI---PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIHGGPFCLSLL-----
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -35020 for 484 contacts (-72.4/contact) +
2D Compatibility (PS) -7013 + (NN) 1183 + (LL) 1212
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -43188.0 ( -89.23 by residue)
QMean score : 0.219
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: