Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QAQCGGRNLSILAPCLPAAKAN-VQPSAACCRALSSFAT--NTGED------CLCAAASSQQQSGAKVEFAKYIPQKC--QLTYK--AGIVCNGVVIPGGQ
1FK5 Chain:A ((1-93))
AISCG-QVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAG--VSGLNAGNAASIPSKCGVSIPYTISTSTDCSRVN-----
General information:
TITO was launched using:
RESULT:
Template:
1FK5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37979 for 482 contacts (-78.8/contact) +
2D Compatibility (PS) -8202 + (NN) -3095 + (LL) -92
1D Compatibility (HY) -2400 + (ID) 1450
Total energy: -53218.0 ( -110.41 by residue)
QMean score : 0.322
(partial model without unconserved sides chains):
PDB file :
Tito_1FK5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1FK5-query.scw
PDB file :
Tito_Scwrl_1FK5.pdb
: