Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QPSPNPSCGAQLSQLGPCARYSV----PPMPGQALP--APGPECCSALGSVSRDCACGAID--------------------------------IINSL--PAKCGLPRISCQ
1BEA Chain:A ((15-109))
------------NPLPSCRWYVTSRTCGI--GPRLPWPELKRRCCRELADIPAYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI---
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28030 for 332 contacts (-84.4/contact) +
2D Compatibility (PS) -5450 + (NN) -673 + (LL) 104
1D Compatibility (HY) -5600 + (ID) 850
Total energy: -40499.0 ( -121.98 by residue)
QMean score : 0.367
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: