Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ICDISSGGIRSCQPAAAVR----NPTDA---PSAECCAALAGADLACLCRYKSVGGM------------WVRFY-K--ID----VKRAMALPGKCGLTMPANC
1B1U Chain:A ((14-108))
-----HNPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATI---
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37141 for 459 contacts (-80.9/contact) +
2D Compatibility (PS) -7255 + (NN) -735 + (LL) 480
1D Compatibility (HY) -2400 + (ID) 650
Total energy: -47701.0 ( -103.92 by residue)
QMean score : 0.277
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: