Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GSDCQNDIQMLETTCYKYVAK----DAPTSP---PSQECCDTMNGVDVPCVCSYLGAPGIKENI-------------S-------M--EKVFYV--AQQCGVSIPGNCGGSKRA
1BEA Chain:A ((18-109))
------------PSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIPAYCRCTAL-SILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATI---------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -34182 for 355 contacts (-96.3/contact) +
2D Compatibility (PS) -6080 + (NN) -499 + (LL) 124
1D Compatibility (HY) -3200 + (ID) 600
Total energy: -44437.0 ( -125.17 by residue)
QMean score : 0.281
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: