Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------MMVAAQCDAGQLVVCAPAILGGAMPT----------ASCCSKLREQEQQGC------------FCEYLRNPAYAGYINSQTA-RGAIAAC---NVTL-PQCS------------------------------------------------------------------------------------------- |
| 1VLW Chain:A ((-1-203)) | HMKMEELFKKHKIVAVLRANSVEEAKEKALAVFEGGVHLIEITFTVPDADTVIKELSFLKEKGAIIGAGTVTSVEQCRKAVESGA--EFIVSPHLDEEISQFCKEKGVFYMPGVMTPTELVKAMKLGHTILKLFPGEVVGPQFVKAMKGPFPNVKFVPTGGVNLDNVCEWFKAGVLAVGVGSALVKGTPDEVREKAKAFVEKIRGC |
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General information:
TITO was launched using:
| RESULT:
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Template: 1VLW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -39178 for 405 contacts (-96.7/contact) +
2D Compatibility (PS) -7888 + (NN) -2746 + (LL) 236
1D Compatibility (HY) -2400 + (ID) 600
Total energy: -52576.0 ( -129.82 by residue)
QMean score : 0.260
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