Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
RECVPQLNRLLACRAYLAAP--GAAAAAP----SAECCGALAGISRECACSTMAI---------------------------------INSIPSRCGVSQVNCTASSTST
1B1U Chain:A ((15-108))
-------NPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATI---------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -31895 for 339 contacts (-94.1/contact) +
2D Compatibility (PS) -5880 + (NN) -2833 + (LL) 800
1D Compatibility (HY) -4800 + (ID) 750
Total energy: -45358.0 ( -133.80 by residue)
QMean score : 0.416
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: