Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------SSDVCTVVSPVLESCYIALQSGESFMKSESVCCKSLEILENRIRDSDHQFTRYAVCECFKASDNDKQVLVNENLLEVQVLCGPHVPYPITSYSDCLQYADEEIARTAL
1HCR Chain:A ((1-52))
GRPRAINKHEQEQISRLLE-------KGHP---RQQL-AIIFGI-------GVSTLYRY-----FPASSIKKRMN---------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1HCR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -19639 for 231 contacts (-85.0/contact) +
2D Compatibility (PS) -4467 + (NN) 131 + (LL) 5124
1D Compatibility (HY) -2000 + (ID) 550
Total energy: -21401.0 ( -92.65 by residue)
QMean score : 0.187
(partial model without unconserved sides chains):
PDB file :
Tito_1HCR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HCR-query.scw
PDB file :
Tito_Scwrl_1HCR.pdb
: