Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
WTVNIPTPQSSCPLANPLSLNVCVDLLGLVHVVLGNPSTVECCDIINGLGI-------DATVCLCTAIHLKVLGLNVDIPLALKLLVTCGRELP----NGLTC
1BWO Chain:A ((6-87))
---------------VDSLVRPCLSYVQG-----GPGPSGQCCDGVKNLHNQARSQSDRQSACNCLKGIARGIH-NLNEDNARSIPPKCGVNLPYTISLNIDC
General information:
TITO was launched using:
RESULT:
Template:
1BWO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50886 for 449 contacts (-113.3/contact) +
2D Compatibility (PS) -7341 + (NN) -2310 + (LL) 1568
1D Compatibility (HY) -800 + (ID) 750
Total energy: -60519.0 ( -134.79 by residue)
QMean score : 0.438
(partial model without unconserved sides chains):
PDB file :
Tito_1BWO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BWO-query.scw
PDB file :
Tito_Scwrl_1BWO.pdb
: