Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQQPANCNGQLNQLIPCLSYVQGQ-----ATQ----PAQSCCSGLKSIAGSNPACLCSLISANAG---------------SIPG----I--NSTLALELPAKCNLQGLNP-SLCSVFISGFLPLR
1B1U Chain:A ((16-116))
------------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI---PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIHGGPFCLS---------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -48360 for 473 contacts (-102.2/contact) +
2D Compatibility (PS) -6851 + (NN) -38 + (LL) 828
1D Compatibility (HY) -4800 + (ID) 850
Total energy: -60071.0 ( -127.00 by residue)
QMean score : 0.377
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: