Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQQPANCNGQLNQLIPCLSYVQGQ-----ATQ----PAQGCCSGLKSIAGSNPACLCSLISANAG---------------SIPG----I--NSTLALELPAKCNLQGLNPSLCSGKF
1B1U Chain:A ((16-109))
------------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI---PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIH--------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39452 for 413 contacts (-95.5/contact) +
2D Compatibility (PS) -6188 + (NN) 454 + (LL) 308
1D Compatibility (HY) -4400 + (ID) 800
Total energy: -50078.0 ( -121.25 by residue)
QMean score : 0.373
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: