Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
AQCNGSPAMLASCLPATQSST------SY---PGAQCCSSLTRFRGNPDCLCSTMLTARQ---------------QFTF-----SVP--NAFTIPERCGYANEIPPHYKCGNYVVGH
1B1U Chain:A ((16-107))
--------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI--PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLAT---------------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40553 for 386 contacts (-105.1/contact) +
2D Compatibility (PS) -5921 + (NN) 1391 + (LL) 352
1D Compatibility (HY) -2000 + (ID) 600
Total energy: -47331.0 ( -122.62 by residue)
QMean score : 0.299
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: