Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QREPAKCGSSDAGSVLMPCFAFLEQQSR--EP-------SARCCSAVANSTQKEPPRCLCVFLDQ--------LA--------------RAM--NRTQPLQLPSLCGDARLTA-ERCKGLFVANRFA
1B1U Chain:A ((16-117))
--------------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI----PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATIHGGPFCLSL-------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -38350 for 445 contacts (-86.2/contact) +
2D Compatibility (PS) -7222 + (NN) -5526 + (LL) 1192
1D Compatibility (HY) -2800 + (ID) 800
Total energy: -53506.0 ( -120.24 by residue)
QMean score : 0.167
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: