Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCTFESTLPDLADCRPYVSTG---STQTD----PTAACCSELRNVGHSCLCDLLRDT------KVP---------S-D--IDIN----RAVALPGKCSLPGADSCS
1B1U Chain:A ((15-108))
---------NPLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAIPAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATI----
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27935 for 401 contacts (-69.7/contact) +
2D Compatibility (PS) -6752 + (NN) -1400 + (LL) 664
1D Compatibility (HY) -4000 + (ID) 800
Total energy: -40223.0 ( -100.31 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: