Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QQQSCSDWTQLLDCQNAASDPS-----AT----PSGECCNRIRQYQNAPDCLCTMLLAARNAA-QST----G---L--------PFNLQAALSI--PAKCHVQVPSGYSCAGIPIPSS
1BEA Chain:A ((16-111))
---------PLPSCRWYVTSRTCGIGPRLPWPELKRRCCRELADIP--AYCRCTALSILMDGAIPPGPDAQLEGRLEDLPGCPREVQRGFAATLVTEAECNLATISG-----------
General information:
TITO was launched using:
RESULT:
Template:
1BEA.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -37302 for 433 contacts (-86.1/contact) +
2D Compatibility (PS) -7252 + (NN) -1862 + (LL) 720
1D Compatibility (HY) -2800 + (ID) 750
Total energy: -49246.0 ( -113.73 by residue)
QMean score : 0.473
(partial model without unconserved sides chains):
PDB file :
Tito_1BEA.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BEA-query.scw
PDB file :
Tito_Scwrl_1BEA.pdb
: