Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
GCGPKLGVLLPCLPFLQGQG-----SN----PTQPCCNGLETVVKSNPACLCALVNS---Q----LG--------------NRI--NITLALSLPSLCNLAGVTIDLCN
1B1U Chain:A ((16-108))
-------PLDSCRWYVSTRTCGVGPRLATQEMKARCCRQLEAI---PAYCRCEAVRILMDGVVTPSGQHEGRLLQDLPGCPRQVQRAFAPKLVTEVECNLATI------
General information:
TITO was launched using:
RESULT:
Template:
1B1U.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -50582 for 374 contacts (-135.2/contact) +
2D Compatibility (PS) -5945 + (NN) 1986 + (LL) 200
1D Compatibility (HY) -3200 + (ID) 750
Total energy: -58291.0 ( -155.86 by residue)
QMean score : 0.347
(partial model without unconserved sides chains):
PDB file :
Tito_1B1U.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1B1U-query.scw
PDB file :
Tito_Scwrl_1B1U.pdb
: