Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QCQGSIQ--DLKICVPYVQKK-GP---K----IPP-----------SQACCDAIKGVDILCVCHHLPPDIGELI------------SIEKVVFVLQVCREPLAPGTKCGT
1PSY Chain:A ((18-116))
-CRQEVQRKDLSSCERYLRQSSSRRSTGEEVLRMPGDENQQQESQQLQQCCNQVKQVRDECQCEAIKYIAEDQIQQGQLHGEESERVAQRAGEIVSSCGV----------
General information:
TITO was launched using:
RESULT:
Template:
1PSY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -42736 for 470 contacts (-90.9/contact) +
2D Compatibility (PS) -6698 + (NN) -2809 + (LL) 40
1D Compatibility (HY) -1600 + (ID) 800
Total energy: -54603.0 ( -116.18 by residue)
QMean score : 0.337
(partial model without unconserved sides chains):
PDB file :
Tito_1PSY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1PSY-query.scw
PDB file :
Tito_Scwrl_1PSY.pdb
: