Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
----------AMSAAECKEERRLGIKVCTPVVYGNDPTPACCERVRVTHVECVCPMITPKLAPLIDVDRLVRLIKGCGRKVPRHFKCGGITTP
1CC8 Chain:A ((2-73))
AEIKHYQFNVVMTCSGCSGAVNKVLT-------KLEPD------VSKIDISLEKQLVD--VYTTLPYDFILEKIKKTGKEVRSGKQL------
General information:
TITO was launched using:
RESULT:
Template:
1CC8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -20853 for 349 contacts (-59.8/contact) +
2D Compatibility (PS) -6738 + (NN) -4431 + (LL) 704
1D Compatibility (HY) -3200 + (ID) 450
Total energy: -34968.0 ( -100.19 by residue)
QMean score : 0.343
(partial model without unconserved sides chains):
PDB file :
Tito_1CC8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1CC8-query.scw
PDB file :
Tito_Scwrl_1CC8.pdb
: