Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
QCQGSIQ--DLKICVPYVQKK---G--PKI---PPS-------QACCDAIKGV--DILCVCHHLPPDIGELI----------S-IEKVVFVLQVCREPLAPGTKCGSKNIKALLS
1W2Q Chain:A ((16-112))
-CERQVDRVNLKPCEQHIMQRIMGEQEQYDSYDIRSTRSSDQQQRCCDELNEMENTQGCMCEALQQIMENQCDRLQDRQMVQQFKRELMSLPQQCNFR-----------------
General information:
TITO was launched using:
RESULT:
Template:
1W2Q.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33959 for 382 contacts (-88.9/contact) +
2D Compatibility (PS) -6714 + (NN) -1332 + (LL) 820
1D Compatibility (HY) -3200 + (ID) 700
Total energy: -45085.0 ( -118.02 by residue)
QMean score : 0.185
(partial model without unconserved sides chains):
PDB file :
Tito_1W2Q.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2Q-query.scw
PDB file :
Tito_Scwrl_1W2Q.pdb
: