Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
DQVCKGDFGSLVEQCLQYVQKP--GPKTP--PSEGCCNAINTVDIPCVCQHLPPVVGDIV----S---------LEKVAFVLRACGKPLEPGTKCGNYTVPPAV
1HSS Chain:A ((18-106))
------------PACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVD------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -40575 for 390 contacts (-104.0/contact) +
2D Compatibility (PS) -6357 + (NN) -1469 + (LL) 720
1D Compatibility (HY) -4000 + (ID) 550
Total energy: -52231.0 ( -133.93 by residue)
QMean score : 0.318
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: