Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
ATCGQLIDSLIPCITYLQG---GP-G---PSAACCGGVKKLNAAANTGPARKAACNCLKSAAGTIA---RL----------NNNQAAALPGKCGVKIPYKFSTSTNCNSIRF
1HSS Chain:A ((15-106))
-------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHI--------SEWCRCGALYSMLDSMYKEH--GAFPRCRREVVKLTAASITAVCRLPIVVD------------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -44641 for 405 contacts (-110.2/contact) +
2D Compatibility (PS) -6343 + (NN) -2219 + (LL) 1352
1D Compatibility (HY) -5200 + (ID) 650
Total energy: -57701.0 ( -142.47 by residue)
QMean score : 0.342
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: