Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
VITCPDADITLKSCLPYVAHP--TQ-WP---PLECCTAVLGLTARAVTREDRQAVCKCLLGLMNGI-------PG--LD--LTAFAAVPILCAANIGYIIRPNMDCNSVP
1HSS Chain:A ((15-106))
--------PALPACRPLLRLQCNGSQVPEAVLRDCCQQLAHIS--------EWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVD-----------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -73894 for 411 contacts (-179.8/contact) +
2D Compatibility (PS) -6523 + (NN) -860 + (LL) 1332
1D Compatibility (HY) -3600 + (ID) 600
Total energy: -84145.0 ( -204.73 by residue)
QMean score : 0.253
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: