Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
SQVNAPCTWTEISEEYDYCGDSLTRG--VPWVS--PLKVCCDTIKLNKMKCICQVVTKTFSQNFD-------------FYKLSKLSHACGDLLVPGSYCGGNYH
1HSS Chain:A ((18-106))
----------------PACRPLLRLQCNGSQVPEAVLRDCCQQLAHISEWCRCGALYSMLDSMYKEHGAFPRCRREVVKLTAASITAVCRLPIVVD--------
General information:
TITO was launched using:
RESULT:
Template:
1HSS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26155 for 386 contacts (-67.8/contact) +
2D Compatibility (PS) -6054 + (NN) 891 + (LL) 936
1D Compatibility (HY) -2400 + (ID) 500
Total energy: -33282.0 ( -86.22 by residue)
QMean score : 0.120
(partial model without unconserved sides chains):
PDB file :
Tito_1HSS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1HSS-query.scw
PDB file :
Tito_Scwrl_1HSS.pdb
: