Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKEQKCLFVTIAGLPNAGKSTLINSITGKKIAIVTPKVQTTRTQIRGIAIYNETQIIFTDSPGIFSAETKLEKALVKSAW---SAIKGDDVILLLIDASSYLKN--IERIKTIFTRLRH--TKTKCIFV-INKIDLVKKPELKMTYKHLDLLYKLKK--------IFTISALKSDGLSDLMDYLSEVAPVSPWFYGEDQVTDSSTSFLSAEITREKLFLNLREELPYSTAVITEQFEEKKDESLVIKQVIFVLKDSHKKIVLGKGGSNIKKIGIEARIELEKLFERKVHLFLFVKVRPWTDRPEEYIDDV
2QTF Chain:A ((182-352))
--------IGIVGYTNSGKTSLFNSLTGL------------MSPKRYAIPINNRKIMLVDTVGFIRG---IPPQIVDAFFVTLSEAKYSDALILVID-STFSENLLIETLQSSFEILREIGVSGKPILVTLNKIDKINGD----LYKKLDLVEKLSKELYSPIFDVIPISALKRTNLELLRDKIYQLATQLS----------------------------------------------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2QTF.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101263 for 1018 contacts (-99.5/contact) +
2D Compatibility (PS) -15865 + (NN) -10021 + (LL) 12384
1D Compatibility (HY) -13200 + (ID) 2650
Total energy: -130615.0 ( -128.31 by residue)
QMean score : 0.599
(partial model without unconserved sides chains):
PDB file :
Tito_2QTF.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QTF-query.scw
PDB file :
Tito_Scwrl_2QTF.pdb
: