Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MSSDLWNFFTEVPSEGYIVESSYCTDSGCSNYIGNIDLSNIREFNLVSPDRKITKKFEANIIDFFEPRVHLSMDDSGKKINLDIAPENCSATKDGFLCIDKNEQDYKLKILIKKS
1BC8 Chain:C ((6-47))
---TLWQFLLQLLQKP-----Q-N--KHMICWTSN-D----GQFKLLQAE-EVARLWGIRKNKPNMNYDKLSRALRYYYVKNIIKKVNGQKFVYKFVSYPEILNM----------
General information:
TITO was launched using:
RESULT:
Template:
1BC8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -6842 for 216 contacts (-31.7/contact) +
2D Compatibility (PS) -4287 + (NN) -146 + (LL) 2132
1D Compatibility (HY) -4000 + (ID) 350
Total energy: -13493.0 ( -62.47 by residue)
QMean score : 0.487
(partial model without unconserved sides chains):
PDB file :
Tito_1BC8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BC8-query.scw
PDB file :
Tito_Scwrl_1BC8.pdb
: