Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRISNFGPLIAILSSSVLSFTAGQYFSYVIAAVSSSSAVTAAPLAIFAVSMVIALVSAAYLIKLAVSIAGNKKEAGPSREALDRSGQQCTVSYGLTQESVCKDGALKNELNKHISFSSSSPICGTKTFSLSAPLLLNNALPPLLSLPLSQDAGAAPPPPPPPLFSQISLTQPSSAGLFAGVKNTKLKKISGPVKTPEYDDSRNAMLKQIRQGTKLLTKEERDEKLKKQAAMKDDKKEQSSDNVGGYSSTALFEKLKYRRLAIEFSDSESDRSNYSDNGDWSDRSVDKQKELREKKLTKRRGKSTSSNSQPYDEKSSATPSSGYISDDDADQQEPETATSSSCWSNKKEPPPVPPKPNLKCVNLQKEPPPVPPKPNLKCVNLQKESRAFLIKQ |
4UOT Chain:A ((4-34)) | -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TQEYLLKEIMKLLKEQIKLLKEQIKMLKELEKQ---------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UOT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6970 for 114 contacts (61.1/contact) +
2D Compatibility (PS) -3584 + (NN) -3311 + (LL) 16144
1D Compatibility (HY) 0 + (ID) 250
Total energy: 15969.0 ( 140.08 by residue)
QMean score : 0.636
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