Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MEKIENPRENIAYELVNNGSKLTNENKQKILELAKKIKKEENIASILKKSGNNAKKILTITVSFNDQEEK
1OKS Chain:A ((13-42))
------------------SSRLEEDRKRYLMTLLDDIKGANDLAKFHQMLVKIIMKHHHHH---------
General information:
TITO was launched using:
RESULT:
Template:
1OKS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 1758 for 118 contacts (14.9/contact) +
2D Compatibility (PS) -3255 + (NN) -2533 + (LL) 1520
1D Compatibility (HY) -2400 + (ID) 350
Total energy: -5260.0 ( -44.58 by residue)
QMean score : 0.863
(partial model without unconserved sides chains):
PDB file :
Tito_1OKS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OKS-query.scw
PDB file :
Tito_Scwrl_1OKS.pdb
: