Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFKGIITNIGTIINTTIR-SNSDQIFHIK-AQNLSSIHEGDSIACSGVCLTVVDIINDIFTVQISQETMKVSNLGAWKVGKKINLEQAMRLSDKIDGHLVHGHVDETAKILTINQNLGSHEIKLSCP-QELIKFVAKKGSVTLDGVSLTVNSVIGREFTVNIIPYTWQNTTFQYNKVNDYLNLEVDMIARYLDQLIQYKYN
1KZL Chain:A ((1-199))
MFTGLVEAIGVVKDVQGTIDN-GFAMKIEAPQILDDCHTGDSIAVNGTCLTVTDFDRYHFTVGIAPESLRLTNLGQCKAGDPVNLERAVLSSTRMGGHFVQGHVDTVAEIVEKKQDGEAIDFTFRPRDPFVLKYIVYKGYIALDGTSLTITHVDDSTFSIMMISYTQSKVIMAKKNVGDLVNVEVDQIGKYTEKLVEAHIA
General information:
TITO was launched using:
RESULT:
Template:
1KZL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -108005 for 1526 contacts (-70.8/contact) +
2D Compatibility (PS) -21342 + (NN) -2113 + (LL) -28
1D Compatibility (HY) -16000 + (ID) 3450
Total energy: -150938.0 ( -98.91 by residue)
QMean score : 0.405
(partial model without unconserved sides chains):
PDB file :
Tito_1KZL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1KZL-query.scw
PDB file :
Tito_Scwrl_1KZL.pdb
: