Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQPEKTESTGLVLNIESPILIILCILSVAYFIYSEYSVEFTKKISKNDPFSRA-LKNRNKLFKRFFMIR
3MXN Chain:A ((88-116))
-----------------------------------FSVPEMKQ-SKKDPLQYQKFLEGLQKCQRDLIDL
General information:
TITO was launched using:
RESULT:
Template:
3MXN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) 12318 for 130 contacts (94.8/contact) +
2D Compatibility (PS) -2972 + (NN) -2484 + (LL) 3476
1D Compatibility (HY) -800 + (ID) 400
Total energy: 9138.0 ( 70.29 by residue)
QMean score : 0.439
(partial model without unconserved sides chains):
PDB file :
Tito_3MXN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MXN-query.scw
PDB file :
Tito_Scwrl_3MXN.pdb
: