Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNEELLNEIPLLEDKAVFEIESASSLQDLEKVRLSYLGRKGVIKAYFDDLRKVEDTEKKRDLGAIINVLRNKLDQLIMNKESILKAEEVNFKLQNEAIDITLPVRPEKIGRAHPLSKVMNEVKLIFAHMGFRAVNGPD-IEDEFHVFDALNTPSHHPAREEQDTFYLKN---------------------------------KINDKRM-MLRTHTSSMQIRAM----KKAKTFPIKIVAAGRVYRND-FDATHTPMFHQMEGLYVNENVNMGQLKFTIHHFLNKFFGDKELKIRFRNSFFPFTEPSAEVDISYKES--KWIEVLGCGIVHPNVFQNVGIDHTKYSGFAFGIGIERLAMLKYQISDLRNFYDNKISWLSHYGFHFSSLR |
| 3L4G Chain:K ((222-482)) | -------------------------------------------------------------------------------------------------------------GHLHPLLKVRSQFRQIFLEMGFTEMPTDNFIESSFWNFDALFQPQQHPARDQHDTFFLRDPAEALQLPMDYVQRVKRTHSQGGYGSQGYKYNWKLDEARKNLLRTHTTSASARALYRLAQKKPFTPVKYFSIDRVFRNETLDATHLAEFHQIEGVVADHGLTLGHLMGVLREFFTK-LGITQL--RFKPAYNPYTEPSMEV-FSYHQGLKKWVEVGNSGVFRPEMLLPMGLPEN-VSVIAWGLSLERPTMIKYGINNIRELVGHKVNLQMVYDSPLCRLD |
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General information:
TITO was launched using:
| RESULT:
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Template: 3L4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -119936 for 1634 contacts (-73.4/contact) +
2D Compatibility (PS) -23185 + (NN) -6717 + (LL) 9492
1D Compatibility (HY) -20400 + (ID) 4400
Total energy: -165146.0 ( -101.07 by residue)
QMean score : 0.444
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