Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVQFLKENRAKRSLEIDSTVITLAIITLSLALVVYSVIKGVQKVAAKKTDNILSEVESQKVVSPRQKV
2E74 Chain:H ((1-29))
-----------MEIDVLGWVALLVVFTWSIAMVVWGRNGL----------------------------
General information:
TITO was launched using:
RESULT:
Template:
2E74.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5073 for 113 contacts (-44.9/contact) +
2D Compatibility (PS) -2949 + (NN) -908 + (LL) 3704
1D Compatibility (HY) -3600 + (ID) 350
Total energy: -9176.0 ( -81.20 by residue)
QMean score : 0.185
(partial model without unconserved sides chains):
PDB file :
Tito_2E74.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2E74-query.scw
PDB file :
Tito_Scwrl_2E74.pdb
: